MIPModDB@IITKanpur



	MIPModDB

COMILI1387

ACCESSION NUMBER

: EGX93816.1

ORGANISM

: Cordyceps militaris CM01

ANNOTATION

: glycerol uptake facilitator, putative

GENE STRUCTURE

Exons

Introns

Helix start position

Loop B and Loop E start position

SEQUENCE BASED INFORMATION

Length of sequence	Length modeled		Similarity with templates (as calculated by NEEDLE program from EMBOSS Package)
	from	to	1J4N	1FX8	2F2B
393	50	305	33.6	45.8	43.4

View FASTA sequence

STRUCTURE BASED INFORMATION

Residues in selectivity filter	NPA motif		Root mean squared deviation with templates (as calculated by DALI program)
	I	II	1J4N	1FX8	2F2B
FVIR	NPC	NMA	1.7	1.8	1.5

Structure based alignment

View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N

Downloads:

Alignment in PIR Format
Alignment in PAP Format
Modelled Structure in PDB Format
Radius profile along the channel

Last Updated:
Best Viewed at 1024X768 resolution on IE 5.0+, Firefox 1.0+

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
Copyright (c) 2007 All rights reserved, IIT Kanpur