MIPModDB
 
 

CLMICH0213

    ACCESSION NUMBER : YP_001222572

    ORGANISM : Clavibacter michiganensis subsp. michiganensis NCPPB 382
    ANNOTATION : putative glycerol uptake facilitator proteinMIP family


GENE STRUCTURE


    Exons      Introns   Helix start position   Loop B and Loop E start position

SEQUENCE BASED INFORMATION


Length of sequence Length modeled Similarity with templates
(as calculated by NEEDLE program from EMBOSS Package)
  from to 1J4N 1FX8 2F2B
250 1 250 41.5 47 48.3

STRUCTURE BASED INFORMATION


Residues in selectivity filter NPA motif Root mean squared deviation with templates
(as calculated by DALI program)
  I II 1J4N 1FX8 2F2B
WGYR NPA NPA 1.7 1.7 1.5


View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N
Downloads:

Alignment in PIR Format
Alignment in PAP Format

Modelled Structure in PDB Format
Radius profile along the channel
 
 
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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
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