MIPModDB
 
 

BOTAUR0316

    ACCESSION NUMBER : NP_777127.1

    ORGANISM : Bos taurus
    ANNOTATION : aquaporin 1
    UNIPROT ACCESSION : AQP1_BOVIN
    PDB ID : 1J4N


GENE STRUCTURE


    Exons      Introns   Helix start position   Loop B and Loop E start position

SEQUENCE BASED INFORMATION


Length of sequence Length modeled Similarity with templates
(as calculated by NEEDLE program from EMBOSS Package)
  from to 1J4N 1FX8 2F2B
271 1 249 100 39.6 45.7

STRUCTURE BASED INFORMATION


Residues in selectivity filter NPA motif Root mean squared deviation with templates
(as calculated by DALI program)
  I II 1J4N 1FX8 2F2B
FHCR NPA NPA 0.9 2 2.2


View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N
Downloads:

Alignment in PIR Format
Alignment in PAP Format

Modelled Structure in PDB Format
Radius profile along the channel
 
 
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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
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