MIPModDB
 
 

AJDERM1323

    ACCESSION NUMBER : EEQ90809.1

    ORGANISM : Ajellomyces dermatitidis ER-3
    ANNOTATION : aquaglyceroporin


GENE STRUCTURE


    Exons      Introns   Helix start position   Loop B and Loop E start position

SEQUENCE BASED INFORMATION


Length of sequence Length modeled Similarity with templates
(as calculated by NEEDLE program from EMBOSS Package)
  from to 1J4N 1FX8 2F2B
343 55 295 40.5 54.4 43.2

STRUCTURE BASED INFORMATION


Residues in selectivity filter NPA motif Root mean squared deviation with templates
(as calculated by DALI program)
  I II 1J4N 1FX8 2F2B
WGYR NPA NLA 2 1.4 1.7


View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N
Downloads:

Alignment in PIR Format
Alignment in PAP Format

Modelled Structure in PDB Format
Radius profile along the channel
 
 
Last Updated:
Best Viewed at 1024X768 resolution on IE 5.0+, Firefox 1.0+

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
Copyright (c) 2007 All rights reserved, IIT Kanpur